SE2851120

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10125
  • Sorghum bicolor
  • SE2851120
  • PIF/harbinger
  • To1
  • chromosome_7:48362007-48362255
  • TAA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                ACCC     ACCAAAAACTTTTCAAGATTTCCCGTCACATCAAATATTGAAGCACATGCATGCAGCATTAGATATAGACGAAAATAAAAACTAATTGCACAGTTTGTC
  AGGCCTTGTTTAGTTC    TGAAA                                                                                                   
  ||||||||||||||||    |||||                                                                                                   T
  TCCGGAACAAATCAAG    GCTTT                                                                                                   
AA                ----     TTTAAAACCTAAAGCCGTGACATCGTAAAAGCAAAAATAAACTGTTTATAATAGGTTAGTACCTGATTGATTCGAATTTTCTAAGTAGAGCACTAAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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