SE2851147

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10152
  • Sorghum bicolor
  • SE2851147
  • PIF/harbinger
  • To3
  • chromosome_2:73383033-73383281
  • TTA
  • AGGCCTTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               CACCCC    T CAAAAAGTTTTCAATATTCTCCGTCACATCAAATCTTGTGGCACATGCATCAAGCATTAAATATAGACGAAAACAAAAACTAATTACACAGTTTGTCTG
  AGGCCTTGTTTAGTT      GAAA C                                                                                                   
  |||||||||||||||      |||| |                                                                                                    
  TCCGGAACAAATCAA      CGCT T                                                                                                   
AT               ------    - TTTTAAAGCCTAAAGCGATGACATCGTGAAAACAAAAATAAACTGTTTATAACAGGTTAGTACTTGATTTATCCTAGTTTTCTAAGCAGAGTGCTAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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