SE2851161

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10166
  • Sorghum bicolor
  • SE2851161
  • PIF/harbinger
  • To1
  • chromosome_3:54943989-54944236
  • TTA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                AACCCGAAATCCAAAAA    TCAAGATTCCCCGTCACATCGAATCTTGCGACACATGCATAAAACATTAAATATAAATGAAAACAAAAACTAATTACACAGTTTGTCTGTAAA
  AGGCCTTGTTTAGTTC                 GTTT                                                                                             
  ||||||||||||||||                 ||||                                                                                             T
  TCCGGAACAAATCAAG                 CTTT                                                                                             
AT                -----------------    TTTAAAGCCTAAAGCGATGACATCGTGAAAACAAAAATAAACTGTTTATAACAAGTTAATATTTGATTGATCCTAGTTTTCTAAGCAGAGCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3