SE2811179

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10184
  • Sorghum bicolor
  • SE2811179
  • Tc1/Mariner
  • St16
  • chromosome_1:10259030-10259179
  • TA
  • TACTCCCTCTGTTCCAAATATAAGTTGCTTTGACTTTTTTGGTACATCCATTTTGCTATGTACCTAGATATAACATATGTCTAGATACATAGCAAAATCGATGTACCAAAAAAGTCAAAGCAACTTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                   ---A                            C             C         A
TACTCCCTCTGTTCCAAAT    TAAGTTGCTTTGACTTTTTTGGTACATC ATTTTGCTATGTA CTAGATATA 
|||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| C
ATGAGGGAGGTAAGGTTTA    ATTCAACGAAACTGAAAAAACCATGTAG TAAAACGATACAT GATCTGTAT 
                   ATAC                            C             A         A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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