SE2851199

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10204
  • Sorghum bicolor
  • SE2851199
  • PIF/harbinger
  • To3
  • chromosome_7:9064853-9065101
  • TAA
  • AGGCCTTGTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA             TTCACCCC    ACCAAAAAGTTTTCAAGATTCCCTGTCACATCAAATCTTGCGGCACATGCATGAAGCATTAAATATAGACGAAAACAAAAACTAATTACACAGTTTGAC
  AGGCCTTGTTTAG        GAAA                                                                                                   
  |||||||||||||        ||||                                                                                                   T
  TCCGGAACAAATC        CTTT                                                                                                   
AA             ----TACA    TAAAAAATCTAAAGCGATGACATCGTGAAAGCAAACAAACACCATTTATAACAGGTTAGTATCTGATTGATCCCAGTTTTCTAAGCAGAGCGCTAAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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