SE2831204

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10209
  • Sorghum bicolor
  • SE2831204
  • hAT
  • Hat82
  • chromosome_4:52421556-52421746
  • CACCCACC
  • CTTAGTCACCG

Secondary structure and sequence

TSD    TIR
5'



3' 
CACCCACC           -C    CGGGAACGATGCAGCGTTCCTCATTCCGGGAACGAGCGTTCGGGACGGGAACGCGGGAACGAAATCGTTCC
        CTTAGTCACCG  GGAA                                                                       
        |||||||||||  ||||                                                                        
        GAATCAGTGGC  CAAG                                                                       
CCACCCAC           CT    GGCCTTGCTGCCTAGCTCCTTGTTGCTTGGCCCTTGCCCTTGCTACAAAATCTACGTTAAAAATGTGACAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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