SE2851240

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10245
  • Sorghum bicolor
  • SE2851240
  • PIF/harbinger
  • To11
  • chromosome_8:53259415-53259645
  • TAA
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   -----------------   GATTATGGCGGTAAAGTTTACCATCTGTTACATCGAATGTTTGTACACATGCATGAAGTACTAAATATAGACTATTTGTGAAACTAAAAACATGTCTAG
  AGG                 GCC                                                                                                   
  |||                 |||                                                                                                    
  TCC                 ACA                                                                                                   
AA   ACCACAAACCAATCCCA   ATTTCAAATTGTCCATAACATCATAAAAGCAAAATAAACTGTTAATTACAGGTTAGTACCTGATTAATCTGAGTTTTCTAAGCGGAGCGTTTAATAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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