SE2851250

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10255
  • Sorghum bicolor
  • SE2851250
  • PIF/harbinger
  • To111
  • chromosome_4:58854625-58854757
  • TTA
  • AGGGCCCGTTCGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT              TG       ACCATGGCCTGAAATCATTCCTGGCTGGATTGTTTCCCATAT
  AGGGCCCGTTCGTT  ATGGGGA                                          
  ||||||||||||||  |||||||                                          T
  TCCCGGGCAAGCAA  ATCCGGT                                          
AT              --       CCTAACCGGGTCCTTAACAAGGTCGACGAGTATCGAATACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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