SE2851251

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10256
  • Sorghum bicolor
  • SE2851251
  • PIF/harbinger
  • To11
  • chromosome_9:54772200-54772436
  • TAA
  • AGGGGGTGTTTGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               --GGG     TAAAGTTTAACATGTACTATAGCATTTTCGTCTTATTTGAAAGTTATTGCCCAATCATAGACTAATTAGGCTTAAAAGATTCGTCTCGCAAA
  AGGGGGTGTTTGGTT     GTTAG                                                                                            
  |||||||||||||||     |||||                                                                                            T
  TCCCCCACAAACCAA     GCCAT                                                                                            
AA               AAGAG     TTGAAATGGCAGGCAGTGTAGCTTACAAATCTGTGTACGTACCTTATGATTTATATCTGATAAATGTTTTGATTTTTGTGTCGATCTCTCAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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