SE2851258

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10263
  • Sorghum bicolor
  • SE2851258
  • PIF/harbinger
  • To4
  • chromosome_2:77453514-77453762
  • TTA
  • AGGCCTTGTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT    C        TTCAC     AAACCAAAAAGTTTTCAAGATTTTTCGTCACATCGAATCTTAAGACACATGCATGAAACATTAAATATAGGCGAAAACAAAAACTAATTATACAGTTTGC
  AGGC TTGTTTAG     CTTGA                                                                                                    
  |||| ||||||||     |||||                                                                                                     
  TCCG AACAAATC     CTTTA                                                                                                    
AT    T        -TACA     AAAAAACCTAAAGCGATGACATCGTGAAAGCAAACAAACACCGTTTATAACAAGTTAGTATCTGATTAATCCTAGTTTTCTAAGTAGAGCGCTAAAAGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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