SE2851259

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10264
  • Sorghum bicolor
  • SE2851259
  • PIF/harbinger
  • To1
  • chromosome_8:722920-723167
  • TAA
  • AGGCCTTGTTTAGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA               CACC      TCCAAAAAGTTTTCAA   TCCCCGTCACATCGAATTTTGCGGCACATGCATGAAGCATTAAATATAGACGAAAACAAAAACTAATTGCAAGTTTGTTTGTAAA
  AGGCCTTGTTTAGTT    CCGAAA                GAT                                                                                     
  |||||||||||||||    ||||||                |||                                                                                     T
  TCCGGAACAAATCAA    GGCTTT                AGC                                                                                     
AA               ----      -----------TTTAA   CTAAAGCGATGACATCGTGAAAGCAAAAATAAACTGTTTATAACAGGTTAGTACTTGATTGATCCTAGTTTTCTACGCAGAGCGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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