SE2851304

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10309
  • Sorghum bicolor
  • SE2851304
  • PIF/harbinger
  • To94
  • chromosome_9:51182696-51182906
  • TAA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
TA         TTGGTACAGCTCCTCACGAGGGACTCCTCTAGAGGAGCCAGAGCCGTTTTGAAGAAGCCGTAATTTGTAGCTTCGCCAAAACGGCTCCAGCTCC
  AGGGGTTGT                                                                                              
  |||||||||                                                                                              T
  TCCCGGATA                                                                                              
AA         AACCGTCCCGAGAAGAGGCCAAGGTCGAGACTGAAGAAGTCTCCTCGGGACGGTTTGCAAAAAAGATCTCTTCAGCAAAAATACATTTTTGGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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