SE2851316

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10321
  • Sorghum bicolor
  • SE2851316
  • PIF/harbinger
  • To3
  • chromosome_3:62010499-62010747
  • TTA
  • AGGCCTTGTTTAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                CGA      AAA   TTTCGGTACTGTAGCACTTTCGTTTGTTTGTGACAAATATTATCCAATCATAGACTAACTAGGATCAAAAGATTCGTCTCGCGATTTACAGCTA
  AGGCCTTGTTTAGTTC   AAAGTG   AGT                                                                                              
  ||||||||||||||||   ||||||   |||                                                                                              A
  TCCGGAACAAATCAAG   TGGGAC   TTT                                                                                              
AT                ---      ---   TGATTTTTCAAAAGTTCTAAGAGGCAGTGTAGCTTAGAATACCGTGTACGTACTTTGTAATTTATATCTGCTTTTATTTTTGATTAATGTGTCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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