SE1850029

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10357
  • Glycine max
  • SE1850029
  • PIF/harbinger
  • To1
  • Gm12:1982707-1982929
  • TAA
  • AGGTCTTGTTTGGATAAACTTCTCCATAAACACATACAGGAGAAGAAAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                             A   A  C     A        ACAAGTTAAAATAAA      - TCTTCC AAATCAACTTATGCACTTCATTTTTATAAAAGCTAAAAT
  AGGTCTTGTTTGGATAAACTTCTCCATAA CAC TA AGGAG AGAAAATA               ATGGGC T      A                                       
  ||||||||||||||||||||||||||||| ||| || ||||| ||||||||               |||||| |      |                                        
  TCCGGAACAAACCTATTTGAAGAGGTATT GTG AT TCTTC TCTTTTAT               CTTCCA T      T                                       
AA                             C   A  A     C        --------------C      C ------ TACTTAATTGGAAGAGGTATTCGATTTTACTTGGATACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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