SE1820042

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10370
  • Glycine max
  • SE1820042
  • Mutator
  • M1
  • Gm18:58609425-58609675
  • CACTCTAGA
  • TCTAGAGGGTGTTGCTAGGTGCACCCAGCATT

Secondary structure and sequence

TSD    TIR
5'



3' 
CAC       ---                         --AT      TGCACCCAGCACTTAAGATAAAATGACGAAAATACCCTTGATCCGTAAGCCATTTAAGTTTATCTGTAAAAGTCTTACGGA
   TCTAGAG   GGTGTTGCTAGGTGCACCCAGCATT    TGCTGG                                                                                 
   |||||||   |||||||||||||||||||||||||    ||||||                                                                                 T
   AGATCTC   TCACAACGATCCACGTGGGTCGTAA    ATTTTA                                                                                 
          ACC                         ATTA      TAGTTTTAACAGGAACACGAAAAAAAACGTAAACACTATCCACACACACTCCCACTAGGCATTTAGCATGCCTAGTTCAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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