SE1820048

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10376
  • Glycine max
  • SE1820048
  • Mutator
  • M1
  • Gm13:33846752-33847113
  • AATTTTATG
  • GGGTGTTGCTAGGTGCACCAGCATTATTGTTGGTGCACCCAGCATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AATTTTATG                   -                            TATTA    A  ---    TT  CCTTACGCTTTTTTGGCATTTGTGATGGATGTGTGAGGATGATCCATAAATCATACGAATCATGTTGATCCGTAAGGTTGATACAGATCAACTTGATCCGTAAGCC
         GGGTGTTGCTAGGTGCACC AGCATTATTGTTGGTGCACCCAGCATTT     AAAT CC   AAAA  GC                                                                                                          
         ||||||||||||||||||| ||||||||||||||||||||||||||||     |||| ||   ||||  ||                                                                                                           
         CCCACAACGATCCACGTGG TCGTAATAACAACCACGTGGGTCGTAAA     CTAC TT   TACT  TT                                                                                                          
GTATTTTAA                   G                            ---TT    -  TAT    --  TATAGAAACTAGGCATTCGATAAATTCAACTAGGCATTTTCAGAATGCCTAGTTGAACTAGGCATTCGAAAAATGCCTAGTTCAACTAGGCATAACAAGGCATTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3