SE1820060

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10388
  • Glycine max
  • SE1820060
  • Mutator
  • M17
  • Gm15:7832616-7832830
  • TTAATCATT
  • C

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAT     A        A -   CACACTCCTTGTAAGATACTCCCTCCAATTGCTTAAAATTTATTAAAACTACAGAATTATGAATGAGGTTCATTAAATAAGCAA
     CATTC GGAGTGCT G CAA                                                                                    
     ||||| |||||||| | |||                                                                                    C
     TAATT CTTTTTAC A TCG                                                                                    
 TTAC     -        - A   TTATGTGAGATATGATGTGAGAAGAATTATGTAAGAGATGACAACCGACTTTAAATAGCTTTTAGTAATTTAACACATCCAGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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