SE1860072

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10400
  • Glycine max
  • SE1860072
  • Micron
  • Mim1
  • Gm03:38272162-38272376
  • TATATAT
  • TATATATATGGGAGGGGATCCACTTACTCCAAGAGTAACTCTTTTATAGTTACTTCTCATCCTCACCGTTTATTTTCTTAAGATCTAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
           -  ------      C                                   C                       A         TATT  AA    TAAC
TATATATATGG GA      GGGGAT CACTTACTCCAAGAGTAACTCTTTTATAGTTACTT TCATCCTCACCGTTTATTTTCTT AGATCTAAT    GT  TAAG    
||||||||||| ||      |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    ||  ||||     
GTATATATATC CT      TCCCTA GTGAATGAGGTTCTCATTGAGAAAATATTAATGAG AGTAGGAGTGGTAAGTAAAAGAA TCTAGATTA    CA  ATTC    
           T  TTCTCC      A                                   A                       C         ---C  --    TCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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