SE1820078

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10406
  • Glycine max
  • SE1820078
  • Mutator
  • M21
  • Gm03:31536577-31536789
  • TTTATTTTA
  • AGGACAAAACTCAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTATTTT           C  ATACAGACATAC      A     A          ---     A                  C  AT     A     ----T       TA
        AGGACAAAACT AG            AGTTTC TAGGT TTTTTGGTGT   TCTTC ATTAGAATTGGAGTTTTA CT  GTAAT TATGT     GATCTTT  
        ||||||||||| ||            |||||| ||||| ||||||||||   ||||| |||||||||||||||||| ||  ||||| |||||     |||||||   
        TCCTGTTTTGA TC            TCAAAG ATTCA AAAAATCACA   AGAGG TAGTCTTAACCTCAAAGT GA  TATTA GTGCA     TTAGAAG  
ATTTTATT           A  --------CACA      A     C          ACA     C                  A  AC     G     TTATT       AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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