SE1850082

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10410
  • Glycine max
  • SE1850082
  • PIF/harbinger
  • To12
  • Gm07:44171063-44171225
  • TTA
  • GCATGTTTGGTTTGCAGTTGCAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAGA                    C   ATTACCTTTCAG     AGTAATTTTGCCAACAGATCTAGGCCCTTGCTTTTGC
     GCATGTTTGGTTTGCAGTTG AAA            GCAAA                                     
     |||||||||||||||||||| |||            |||||                                     A
     CGTACAAACCAAACGTCAAC TTT            ACGTA                                     
ATTCA                    C   ----ACAACACT     CAAGGTTACGTTTAAATTACCCATTTTTGTTTTACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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