SE1850087

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10415
  • Glycine max
  • SE1850087
  • PIF/harbinger
  • To12
  • Gm10:45891003-45891167
  • TAA
  • AGTGCATGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  T         ----------   -    G  -   AATGCTACAACGCGTGTTTTTCAATGCAAATCCAACGGATGAAAGCAAAA
  AG GCATGTTTG          ATT TGCA TT GGA                                                  
  || |||||||||          ||| |||| || |||                                                   
  TC CGTACAAAC          CGT TTAA TG AAA                                                  
AA  T         CAAACATCAA   C    -  C   CTCCATTTTCATTAAAACGGTTACCTAGCCCTGGGAACAAAAACACTAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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