SE1820091

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10419
  • Glycine max
  • SE1820091
  • Mutator
  • M1
  • Gm16:4095908-4096284
  • TTGATATTA
  • TGATATTAGGGTGTTGCTAGGTGCACCCAGCATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
T        -                           AAG    AAT    AAAATACTCT -   C GTAAGTCTTTTAAGTTGATTCGTAAAAGGTTTACGGATCAACTTGATCCGTAAGCCTTTTATGGATCAACTTGATCGGTAGAAGCCTTACGAATCAACTTGATCTGTAAGCCTTTTACGGATTAAGTTG
 TGATATTA GGGTGTTGCTAGGTGCACCCAGCATTT   ATGA   GATG          T GAT C                                                                                                                                 
 |||||||| |||||||||||||||||||||||||||   ||||   ||||          | ||| |                                                                                                                                 A
 ATTATAGT CCCACAACGATCCACGTGGGTTGTAAA   TTTT   TTAT          G TTT T                                                                                                                                 
         T                           -AA    ---    ---------- G   - GACAGGAACGTAAAAAAAGCGTAAATACTATCTACACATACTCCCACTAAGCATTTAGCATGCCTAGTTGAACTAGGCATTCCAACTATGCCTAGTTCAACTAGGCATACAACTATAATTCGTATGTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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