SE1830104

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10432
  • Glycine max
  • SE1830104
  • hAT
  • Hat9
  • Gm02:48992254-48992444
  • GAACCAAT
  • CAAGGTTTTAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
GAACCAAT             ------   AAGTAACTGCAATTGCAGCCACAATGCCAAGGTTTTAGGGGTCTCTGCAACCACATCACAACCACAAT
        CAAGGTTTTAAAT      GAC                                                                    
        |||||||||||||      |||                                                                    T
        GTTCCAAAATTTA      GTA                                                                    
TAACCAAG             ACGTCA   CCAATACCAAAGTTACCGCTAGGAACTATAACACCCTTTAATATCTGTTTACACCGACTACGTCGATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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