SE1850135

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10463
  • Glycine max
  • SE1850135
  • PIF/harbinger
  • To2
  • Gm01:3625895-3626050
  • TCA
  • ATAGTGTGTTTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TC               AATACAAAAG     ATTCTATCCCACAAAATCAAGGTGATATCATGAAAAAGTAAAAGAAACT
  ATAGTGTGTTTGGAT          AATCA                                                 
  |||||||||||||||          |||||                                                  
  TATCACACAGACCTA          AAGGA                                                 
AC               ------ATCG     CCACTCTTTATTAGTTAATGAAAAAGTACTACTTCCATTTCGTTGTTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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