SE1860157

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10485
  • Glycine max
  • SE1860157
  • Micron
  • Mim1
  • Gm09:39102837-39103044
  • TATATAT
  • TATATATATGAGGAGGGATCAAGTTACACCAAGAGTAATTCTAAGAAATTACTCTTCATCCTCACCATTCATTTTCTTGAAATCTAATGGTTATTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
         T                                       -                                            --AT   TTAA
 TATATATA GAGGAGGGATCAAGTTACACCAAGAGTAATTCTAAGAAA TTACTCTTCATCCTCACCATTCATTTTCTTGAAATCTAATGGTT    TGA    
 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    |||     
 ATATATAT CTCCTCCCTAGTTCAATGTGGTTCTCATTGAGATTCTTT AATGAGAAGTAGGAGTGGTAAGTAAAAGAACTTTAGATTACCAA    ACT    
T        -                                       C                                            CATT   TACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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