SE1820158

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10486
  • Glycine max
  • SE1820158
  • Mutator
  • M18
  • Gm09:2911431-2911613
  • TATAAAAAG
  • AGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 TATAAAA   AGTCT    ----T       ---   AAAGGGCATTGGTTAAGGAATTTAAAGAAGAAATTTTTTATTGGAAATCATATCGAAG
        AGG     TGCT     ACTAATG   CCT                                                          
        |||     ||||     |||||||   |||                                                           
        TCC     ACGA     ATTCCTT   TTT                                                          
GAAAAATA   -GTTT    TTTCA       CAT   CATCTTTCAAAAAATAACCCTACGTATTTTTTACGCGATGGGACACTAAAAATTACAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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