SE1830193

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10521
  • Glycine max
  • SE1830193
  • hAT
  • Hat3
  • Gm01:47651473-47651670
  • ATCTTGAT
  • ATCTTGATCTATGAAGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
   TT              CGACA      --  GACACGGACACCGGACACGACACGGATACGGACACGTGGACACCTGTAATGTCCAAAATATAAAACGT
ATC  GATCTATGAAGCAC     CCGACA  CC                                                                    
|||  ||||||||||||||     ||||||  ||                                                                    A
TAG  CTAGATACTTCGTG     CCTGTG  GT                                                                    
   TT              -----      AA  CGGGAAACGGCACAGGCCACAGGCTGTGCGCAGGCACAGTCACAGGCTGTGGCTGTGCTGTGGGCATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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