SE1810194

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10522
  • Glycine max
  • SE1810194
  • Tc1/Mariner
  • St9
  • Gm08:15167831-15168115
  • TA
  • TACTCCCTCCTGTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
         CT    ------    TATATAAGCAACAAAAGTGTCTTATTTTTTTTGTCTCAAATATAAGCAAATCTCAATTACCTATGTCTTATTTAATCAGACTATCTCCAAAATATCCTTCATTTTATAAGGTCAAAGACT
TACTCCCTC  GTCT      CAAA                                                                                                                        
|||||||||  ||||      ||||                                                                                                                        T
ATGAGGGAG  CAGA      TTTC                                                                                                                        
         AT    ACTATT    TGTATGAAGTGTGAATAATTCTTTTAATCAATTAAAGTAATTTAACACAGTAAAGGTTAATTCTTTTATTTGTAAAAAATATTTGATAGGAAGTCACCTTGAACTATAGTTCGTATTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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