SE1830219

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10547
  • Glycine max
  • SE1830219
  • hAT
  • Hat3
  • Gm01:1934142-1934334
  • ATAATTAG
  • TAATTAGCTATGAAGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
A      G                  ------C  GTCCCTTGCCGTGTCCGGTGTCCGACACGACACTAACATCAACACTGACACGATACCGACGCCC
 TAATTA CTATGAAGCACGGACACC       CA                                                                
 |||||| ||||||||||||||||||       ||                                                                G
 ATTAAT GATACTTCGTGGCTGTGA       TG                                                                
G      A                  CTATACC  TGGCCTGTGCTGTGCCTGTGCTTGTGCACTTGTGGACAGTTTGTGTAGTTTAAGTTGGGCCTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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