SE1820227

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10555
  • Glycine max
  • SE1820227
  • Mutator
  • M1
  • Gm03:30479130-30479522
  • CTGGTAATT
  • GGGTGATGCTAGGTGCACCCAGCATTATTGCTGGTGCACC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTGGTAATT     A             C          C         --CA      -- TTTAAAATACCAAAACTATCCCTGTACTTTTTTCGCATTTGTGATGGGTGTGTGTGAGAGTGGTCCGTAAATCGTACGGATCAAGTTGATCCGTAAGGTTGATACGGATCAACTTGATCCGTAAATCTTTTACGGA
         GGGTG TGCTAGGTGCACC AGCATTATTG TGGTGCACC    GTATTT  T                                                                                                                                        
         ||||| ||||||||||||| |||||||||| |||||||||    ||||||  |                                                                                                                                        A
         CCCAC ACGATCCACGTGG TCGTAATAAC ACCACGTGG    TGAATT  A                                                                                                                                        
TTAATGGTC     A             A          A         ATTG      CC CTTTACTGCTTTTATAGGAACTAAGCATTCGGTAAATTCAACTATACATCTTCGGAATGCCTAGTTGAACTAGGCATTCGGAAAATGACTAGTTCAACTAAGTATTCTGAAGATACCTAGTTCAACTAAGCATAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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