SE1850239

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10567
  • Glycine max
  • SE1850239
  • PIF/harbinger
  • To10
  • Gm01:12897888-12898194
  • TAA
  • AGAGCATCTCCAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TA       C      ------       ATTCATGAGTTTTTTAATCATTTTTTTGTGGTACCCGTATCAGTTTTTGTGATCTCGCAGTGTCATATCATTCATAAGAAACTCATGAAATTTTACTCCAATACAAGAAATCGTAAAAAATCGCAAG
   AGAGCAT TCCAAT      GCAAGAA                                                                                                                               
   ||||||| ||||||      |||||||                                                                                                                                
   TCTCGTA AGGTTA      ACGAAGG                                                                                                                               
GAA       A      TTCTCC       TACTAAAAAATCCGATTCGTTGTCAAAGAACACTCAAAAAGACGTAACCTCGTATCACTACACTATTTTACTTAAGGAAGTAACGATTCTTATTAAATAATATATTCTTTAAGATTACAAACTTAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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