SE1830242

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10570
  • Glycine max
  • SE1830242
  • hAT
  • Hat3
  • Gm03:31810449-31810635
  • CCTGAGCC
  • CTGAGCCCTATGAAGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
 C  G  CC                 CCCA  CCCTAGCCGTGTCCAGTGTCCGACACGACACCGACACCGACACGACAACGACGCCCGTGTCCAG
  CT AG  CTATGAAGCACGGACAC    GC                                                                
  || ||  |||||||||||||||||    ||                                                                 
  GA TC  GATACTTTGTGGCTGTG    CT                                                                
CC  G  -C                 ---A  GTGCCTGTGGTCTGTGCTGTGCCTGTGCCTGTGTACTTGTGGACAGTTTGTGTAGTTTGAGTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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