SE1860245

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10573
  • Glycine max
  • SE1860245
  • Micron
  • Mim1
  • Gm06:23120232-23120425
  • ATATATA
  • ATATATAT

Secondary structure and sequence

TSD    TIR
5'



3' 
         AGAGA           C TA          TACT        --        CTA  C     C  C                 AGTA    AT
 ATATATAT     GGAGGGATCAA T  CTCCAAGAGT    CTTTAAGA  GTTACTCC   TC TCATC TT ATTTTCTTGAAATTTAA    GTTA  
 ||||||||     ||||||||||| |  ||||||||||    ||||||||  ||||||||   || ||||| || |||||||||||||||||    ||||   
 TATATATA     CCTCCCTAGTT A  GAGGTTCTCA    GAAATTCT  TAATGAGG   AG AGTGG AA TAAAAGAACTTTAGATT    CAAT  
A        -----           C AG          --TT        AT        AGC  A     T  C                 --AC    TC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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