SE1820259

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10587
  • Glycine max
  • SE1820259
  • Mutator
  • M48
  • Gm13:20668678-20668884
  • TAATAAAAG
  • AGGACAAAACTTAGATACAGTTCTATAGATGCTTATGGTGTTGTTGTCTAATCAAAATTAGTGTTTTATCTCTATAATCTATGTTGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATAAA    -  A  C      AC      A   A     A          G        A    A T          TA        ---------   G  CTT
       AGGA CA AA TTAGAT  AGTTCT TAG TGCTT TGGTGTTGTT TCTAATCA AATT G GTTTTATCTC  TAATCTAT         GTT AC   
       |||| || || ||||||  |||||| ||| ||||| |||||||||| |||||||| |||| | ||||||||||  ||||||||         ||| ||   T
       TCCT GT TT AATCTA  TCAAGA ATC ACGAA ACCATAACAA AGATTAGT TTAA C CAAAATGGAG  ATTGGGTG         CAA TG   
AAAATAA    T  A  T      CA      A   C     A          G        C    C T          CC        TGTTATTTC   G  CAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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