SE3120007

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10604
  • Fragaria vesca
  • SE3120007
  • Mutator
  • FrvM4
  • LG1:7086051-7086219
  • TATAACTTA
  • GGTTTGGTTTCTGATC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATAACTTAAT    T  ---      A  GTTTAGCAATTTAAAATTCAAG     ACATTAAACTGTGAATCGTCCGATCGTTTAACAATTTAAAATTC
           GGTT GG   TTTCTG TC                      AGCAT                                            
           |||| ||   |||||| ||                      |||||                                             
           TCAA CC   AAAGAC AG                      TATGT                                            
       TAAT    T  TGA      -  ----------------------     ATGCACATATCGTATGTAGTTCAGTACTTGGCAGGCTAGCAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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