SE3120026

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10623
  • Fragaria vesca
  • SE3120026
  • Mutator
  • FrvM9
  • LG1:2653285-2653425
  • TATACTCNG
  • GAGAGCCTATTCGGCGCACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNCGTTCCTCTCG     ---------CC   T          GTCATCTTCA       TTTTTTTTTTTTTTTGGCGGGTCAAAA
                            GAGAG           TAT CGGCGCACCC          CCGTTAA                           
                            |||||           ||| ||||||||||          |||||||                           T
                            CTCTC           ATA GTCGCGTGGG          CCCACGC                           
                           G     CTTGACTTTTA   T          ----------       GGCGCGTGGGCCCACATAGGTGGCAGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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