SE3120084

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10681
  • Fragaria vesca
  • SE3120084
  • Mutator
  • FrvM18
  • LG2:10929299-10929450
  • TATACTCNG
  • TGGTCCAAGGAGAGCCTATTCAGCGCACTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNC   T   A     GCC   T                 CCACCGTCGATTTTGACGCGGACTTAACAGAGCTTTTTG
                  TGG CCA GGAGA   TAT CAGCGCACTCGTCATCT                                       
                  ||| ||| |||||   ||| |||||||||||||||||                                        
                  ACC GGT CTTTT   ATA GTCGCGTGGGCCTACGC                                       
                GA   T   G     --A   T                 GGCGCGTGGGCAGTAGAGGTGGCAGCTAAAACTTTTTCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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