SE3120092

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10689
  • Fragaria vesca
  • SE3120092
  • Mutator
  • FrvM4
  • LG4:20509751-20509910
  • TATAATATA
  • ATATATTGGGTTTGGCTGCTATACATGTATATAACATACATTAATCCGTGAACCGTCCGATCATTTAACGAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATA          -   GG                  -------A          T                 A   AAC    TA
    ATATATTGGG TTT  CTGCTATACATGTATATA        CATACATTAA CCGTGAACCGTCCGATC TTT   GAGT  
    |||||||||| |||  ||||||||||||||||||        |||||||||| ||||||||||||||||| |||   ||||   
    TATATAATCC GAA  GATGATATGTATATGTAT        GTATGTAGTT GGCACTTGGCAGGTTAG AGA   CTTA  
   A          T   AA                  ACATATTC          C                 C   --A    AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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