SE3120106

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10703
  • Fragaria vesca
  • SE3120106
  • Mutator
  • FrvM22
  • LG2:8930828-8931012
  • TATACTCNG
  • GGAAGCAAATTTGCTCCCCACCCTCCTCCCCACCCTTTTAGATGAATACCAAGTGTTATTTTCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACTCNGTCATNCTNNCATGGTAAAAC                   --------------                            A         --------------     C  TCT
                             GGAAGCAAATTTGCTCCCC              ACCCTCCTCCCCACCCTTTTAGATGAAT CCAAGTGTT              ATTTT AC   
                             |||||||||||||||||||              |||||||||||||||||||||||||||| |||||||||              ||||| ||   T
                             CCTTCGTTTAAACGAGGGG              TGGGAGGAGGGGTGGGGAAATCTACTTA GGTTCACAG              TAAAA TG   
                   CAAAATGGTA                   TGGTTAAGGAGGGA                            C         AAAATCCAAATTAA     T  TTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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