SE3120288

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10885
  • Fragaria vesca
  • SE3120288
  • Mutator
  • FrvM6
  • LG6:18703750-18703938
  • TTTAATTTG
  • GGGCTAGTGTTATTAACACACCCTTTTGTGTTAATAACACACCTTATCTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTAATTT                     CC          A                 AATGA   CTAATCATGAAACAAATTCAAGTGGTA
        GGGCTAGTGTTATTAACACAC  TTTTGTGTTA TAACACACCTTATCTAT     GAA                           
        |||||||||||||||||||||  |||||||||| |||||||||||||||||     |||                           A
        TCCGATCACAATAATTGTGTG  AAAACACAAT ATTGTGTGGAGTAGATA     ATA                           
GTTTAATT                     TA          A                 AAAGG   GATGTATAAAGTTAAAATAAATGTTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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