SE3120315

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10912
  • Fragaria vesca
  • SE3120315
  • Mutator
  • FrvM24
  • unanchored:833518-833720
  • TTCATTCTC
  • GGATACAAATTTACTGACCACCTTTATTTGTCTATCAAAGTGCCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCATTCTC            A    C                 C      C   CATTAATTC       A            AC   AA      TAACTA
         GGATACAAATTT CTGA CACCTTTATTTGTCTAT AAAGTG CCA         TTAGTCT TTGACACATGTC  TTT  ATTATT      
         |||||||||||| |||| ||||||||||||||||| |||||| |||         ||||||| ||||||||||||  |||  ||||||      T
         CCTATGTTTAAA GGCT GTGGAAATAAACGGATG TTTCAT GGT         AATTAGA AACTGTGTACAG  AAA  TAATAG      
CTCTTGCTT            C    A                 A      A   ----AAAAA       C            GT   AA      TTCTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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