SE0650002

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10980
  • Thellungiella halophila
  • SE0650002
  • PIF/harbinger
  • To1
  • scaffold_1:10907925-10908115
  • TGA
  • AGAGCATCCGCAATGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TG                AAATACAG    TAGTCTCTTCCCAATTTTTTTAATATTAAAAGTAGGAAAGAAACGTCTCCACCGATACCCATTAAAGAA
  AGAGCATCCGCAATGC        TCTT                                                                     
  ||||||||||||||||        ||||                                                                     A
  TCTCGTAGGCGTTGCG        CTCA                                                                     
AG                --------    TAAATGAGTCCAAAGATCGTTAAAAAAATTAATTTTTTATGTTCACCTTCTTTTTTAAACGACCTCTGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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