SE0630004

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10982
  • Thellungiella halophila
  • SE0630004
  • hAT
  • Hat1
  • scaffold_10:10653692-10653865
  • CTACCATT
  • CAGTGGCGGAGCCACA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTACCATT                ---AATTTTC    C GGGGGCATCAATGGAACATACATAACTTTATGAATGGGGGCGTTAATAA
        CAGTGGCGGAGCCACA          TTCA T                                                 
        ||||||||||||||||          |||| |                                                  
        GTCACCGCCTCGGTGT          ACCC C                                                 
TTACCATC                ATCAAATCCA    - AGTATACGGGGGTCATTTAAAATATTTTACCACGTTAAATATTTCATTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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