SE0650006

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_10984
  • Thellungiella halophila
  • SE0650006
  • PIF/harbinger
  • To3
  • scaffold_10:7538360-7538615
  • TTA
  • AGAGCATGTACATC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                   A   AG  AGGTTCATGGCACAGTTTTTGAGGTAAAAGATCTTAATATTAAAGAAACAGTATCATCCCGACGAACCTGAAGAGACAGTATCATCCCAAAATGAAGCAT
  AGAGCATGTACATCAAGGG TCA  AG                                                                                                    
  ||||||||||||||||||| |||  ||                                                                                                    C
  TCTCGTACATGTAGTCACT TGG  GG                                                                                                    
AT                   -   --  ATTCTCCAAGTGGTCTTTCCCCAAGTAGTCTTATATTATTATAAAAAAAACCAAAATCCAAAAAAAAAATTAAGCTTTTAATATTAAAAATTGGTTAGTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3