SE0630032

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11010
  • Thellungiella halophila
  • SE0630032
  • hAT
  • Hat6
  • scaffold_2:8266986-8267159
  • CTCCAAAA
  • CAGTGGCGGAGCCA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTCCAAAA              -----------    CTTTTTTCATTGGGGGCAAATAAGAGTATATATAATTTTAGAAGTGGGGGCATTG
        CAGTGGCGGAGCCA           GAAA                                                       
        ||||||||||||||           ||||                                                       A
        GTCACCGCCTCGGT           TACC                                                       
AAAACCTC              GAAACAGATTG    CCAGTAAGCGGGGGTAACTAAAATTTTAAAACCACATCAAATAATTTCGGTTTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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