SE0630069

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11047
  • Thellungiella halophila
  • SE0630069
  • hAT
  • Hat1
  • scaffold_10:10653692-10653865
  • AATGGTAG
  • CAGTGGCGGAGCCACATAGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AATGGTAG                T     -AGG     GTCATATGCCCCCAGTAAATTTTATAAAATGGTGCAATTTATAAAGTAA
        CAGTGGCGGAGCCACA AGTTT    TTGGG                                                 
        |||||||||||||||| |||||    |||||                                                  
        GTCACCGCCTCGGTGT TTAAA    GTGAC                                                 
GATGGTAA                -     AGAA     CCCCGTAGTTACCTTGTATGTATTGAAATACTTACCCCCGCAATTATTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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