SE0630081

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11059
  • Thellungiella halophila
  • SE0630081
  • hAT
  • Hat5
  • scaffold_7:258395-258578
  • GTCTTTCA
  • CAGTGGCGGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCTTTCA           CCAGAACATT       ------    G  AAAACGTATTTAATGGGAACATATATGCTATTTAGTGTGGGGGCAACTAGT
        CAGTGGCGGAG          TTTCTAT      TAGG AC                                                   
        |||||||||||          |||||||      |||| ||                                                    
        GTCACCGCCTC          ATATATG      AACC CC                                                   
ACTTTCTG           ---------C       TTACTC    -  CGTCAACGGGGGTTATTTTTTTTTATAAATCACATTTAAACATTGTTATTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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