SE3740356

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11424
  • Solanum lycopersicum
  • SE3740356
  • CACTA
  • Ca3
  • SL2.40ch08:2483622-2483763
  • TAA
  • ACACTATAAGAAAATTATGAATTACATGAGGATTTTTTTGGGAATTAGTATGAAAATTTGCAGGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA              T                            A                C      AT
  ACACTATAAGAAAA TATGAATTACATGAGGATTTTTTTGGGA TTAGTATGAAAATTTG AGGAAA  
  |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||  A
  TGTGATGTTCTTTT ATACTTAATGTACTCCTAAAAGAACCCT AATCATATTTTTAGGC TTTTTT  
AA              C                            -                A      GA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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