SE0810004

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11633
  • Thellungiella salsuginea
  • SE0810004
  • Tc1/Mariner
  • St1
  • Scaffold_22376:18505-18759
  • TA
  • TACTCCCTCCGTTTCACAAAGAGTGTCGTTCTGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
                              C      T    -     TTTCAAAAAGAATGTCGTTTTAGAATTCTAATGTAATTTTTAACATAAAATACCATTTTTAACCTCAATAAATTCAGAAA
TACTCCCTCCGTTTCACAAAGAGTGTCGTT TGACAC TTTT TTTTG                                                                                
|||||||||||||||||||||||||||||| |||||| |||| |||||                                                                                A
ATGAGGGAGGCAAAGTGTTTCTTACAGCAA ACTGTA AGAA TGTGT                                                                                
                              A      -    G     TTAATTCTTTATTTTATTTTCCAGAGAATATGGGAATAAATAAACGTCTTTTACTGAGAACATTAATATAAATATTAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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