SE0830022

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11651
  • Thellungiella salsuginea
  • SE0830022
  • hAT
  • Hat2
  • Scaffold_13016:16429-16602
  • TTTTGGAG
  • TTTGGAGCAGTGGCGGAGCCACTTTGTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
T                    ----     -G   ------------------------------------AACAT     CATTCGCCCCCATTGATTTTAAAATT
 TTTGGAGCAGTGGCGGAGCC    ACTTT  TCT                                         GGGGT                          
 ||||||||||||||||||||    |||||  |||                                         |||||                          T
 AGGTTTTGTCACCGCCTCGG    TGAAA  AGG                                         GTAAC                          
G                    TCTT     AA   AACCCCCGTTTATTCTCATATATATTAAAATCTTCACCCCC     TATAAACCGAAATTATTTGATGTGGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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